Well, I didn't plan on writing much here, but I will try to help in the shortest way possible.
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corboy
1) Are there areas where ex-DW students find they were well prepared?
Not really. Most of what they know is from Ole Nydahl's books, and there is not much Dharma there, if at all.
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2) Are there areas where ex-DW students find that essential elements were left out or taught to them inaccurately?
In pretty much every field of Buddhist knowledge. They know next to nothing about the traditional Kagyu teachings and absolutely nothing about the other lineages of Tibetan Buddhism. They also have no idea what it means to be a Dharma practitioner form a traditional point of view. They have no background in basic Buddhist philosophy; they know nothing about Madhyamaka or the sutra teachings in general, and they know nothing of the traditional meditation systems and cycles connected to the development & completion stages of Anuttara. And, they know nothing about Mahamudra - neither the sutra system of Gampopa, nor the tantric Mahamudra system of the Indian siddhas. They have no real knowledge about the six yogas of Naropa. They have heard some things related to the phowa Ole teaches, but this is a whole new topic and I better not start it here. Anyway, they basically have no clue about any of the core doctrines of their own school.
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(For example, do ex-DW people discover any differences between what they were told about the Bodhisattva Precepts in DW vs the traditional Tibetan paths? )
They are not taught the Bodhisattva precepts. In fact they are taught no precepts. If you ask an average DW student about the upasaka vows he/she would not have a clue of what you are talking about. Some people these days start to lean these things from Shamarpa and some other teachers but the general situation is a disaster. Ole Nydahl himself does not know anything about the Bodhisattva vehicle. He has never, ever given a teaching on bohichitta in his entire career.
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3)If this can be done without disclosing personal details, what has lead some ex-DW persons to request taking refuge again after leaving DW and embarking upon traditional Tibetan Dharma study and practice?
They just realize that they are making contact with Dharma for the first time, so some are requesting refuge. Apart from that over the years I have seen several Tibetan teachers who customarily give refuge on their own accord to people who come from DW. Honestly, to me this seems quite proper.
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4) Are there areas where former DW students typically find themselves surprised or dismayed after they begin traditional practice and study in Tibetan Buddhism?
They usually are quite shocked when they learn about the amount of information, teaching and practices they have been denied access to.
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5) Do DW students begin guru yoga with the necessary foundational instruction and practice experience vs traditional Tibetan Yoga Paths? As in do they do this earlier than is customary or later than customary?
Guru Yoga is a tantric practice and in a certain way it can be said that this is the core practice on the Mahamudra and Dzogchen paths. Traditionally this practice is connected to samaya and if we want to be strict, people should do it after forming a samaya relationship with the lineage and a tantric master through a major Anuttara level Abisheka. This is the way it has usually been done in the Kagyu and Nyingma traditions. Nothing like this is happening in DW. These people have no clue about samaya or transmission. I wouldn't go as far as to say that the Guru Yoga of the 16 Karmapa is harmful done without a link to the lineage blessings. There could probably be some therapeutic relative benefit. However, this is not Guru Yoga, it is just some form of new age self hypnosis.
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An analysis of all this published either here, or elsewhere on the web might be helpful to other ex-DW students.
Maybe, but what really would be helpful to them is to go and talk with some of the genuine Karma Kagyu teachers of the older generation - not about Ole Nydahl, but about the Kagyu doctrine and the traditional stages of the path. If they do that they will find themselves most surprised.